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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
599
histone modification
598
histone
338
narrow histone mark
297
control
259
broad histone mark
109
transcription factor
21
RNA binding protein
8
recombinant protein
5
nucleotide modification
2
chromatin remodeller
Date released
6
August, 2017
5
May, 2021
5
May, 2024
2
November, 2017
1
April, 2019
1
August, 2021
1
November, 2019
Available data
101
bigWig
100
bed narrowPeak
98
bam
89
fastq
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
21
Homo sapiens
Biosample type
9
in vitro differentiated cells
8
tissue
4
cell line
Organ
5
heart
4
connective tissue
3
liver
3
pancreas
1
epithelium
1
kidney
Project
21
AMP
Genome assembly (visualization)
12
GRCh38
8
hg19
Lab
10
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigBed narrowPeak
month_released!
May, 2019
May, 2020
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
cell line
HepG2
3
EndoC_BH1
1
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