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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
18
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
18
DNA binding
2
3D chromatin structure
Target of assay
16
control
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
715
February, 2021
314
May, 2020
299
August, 2021
259
May, 2021
205
February, 2023
201
August, 2017
200
May, 2022
168
July, 2018
106
July, 2019
106
October, 2019
79
November, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
31
October, 2018
30
December, 2017
27
September, 2018
25
February, 2020
23
February, 2018
23
May, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
15
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
69
bam
32
bed narrowPeak
26
bigWig
20
tsv
bigBed narrowPeak
2
bedpe bed3+
2
hic
Organism
66
Homo sapiens
Biosample type
55
tissue
6
cell line
5
in vitro differentiated cells
Organ
45
pancreas
10
heart
6
epithelium
5
kidney
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
49
hg19
47
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
files.file_type!
bigBed narrowPeak
target.investigated_as!
histone
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
6
kidney
5
heart
2
heart right ventricle
2
+ See 1 more…
cell line
EndoC_BH1
1
1
3
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
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