Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
1
Hi-C
Assay category
98
DNA binding
1
3D chromatin structure
Target of assay
75
control
15
histone
15
histone modification
10
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
237
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
November, 2020
14
November, 2018
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
360
bam
298
bigWig
293
fastq
277
bed narrowPeak
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
99
Homo sapiens
Biosample type
67
cell line
29
tissue
3
primary cell
Organ
67
liver
28
brain
4
spleen
2
epithelium
2
vasculature
1
blood vessel
Project
99
AMP
Genome assembly (visualization)
23
hg19
Lab
99
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bigBed narrowPeak
month_released!
November, 2020
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
99 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
cell line
HepG2
66
1
tissue
cingulate gyrus
8
layer of hippocampus
6
spleen
4
substantia nigra
4
caudate nucleus
3
+ See 2 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
Download