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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
5
total RNA-seq
Assay category
66
DNA binding
5
Transcription
Target of assay
56
control
8
transcription factor
2
RNA binding protein
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
194
May, 2020
66
November, 2017
48
August, 2017
40
May, 2022
35
August, 2021
13
December, 2017
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
November, 2018
1
December, 2018
1
February, 2020
Available data
320
fastq
319
bam
273
bigWig
249
bed narrowPeak
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
5
tsv
3
tar
Organism
71
Homo sapiens
Biosample type
71
cell line
Organ
71
liver
28
brain
3
blood
3
bodily fluid
2
epithelium
2
vasculature
1
blood vessel
1
spleen
Project
71
AMP
Genome assembly (visualization)
24
hg19
5
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bigBed narrowPeak
month_released!
November, 2019
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
total RNA-seq
cell line
HepG2
66
5
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