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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 45ATAC-seq
  • 13ChIP-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 45DNA accessibility
  • 13DNA binding
Target of assay
  • 9control
  • 4transcription factor
Date released
  • 66February, 2021
  • 35February, 2023
  • 6October, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2May, 2019
Available data
  • 102bam
  • 85bigWig
  • 74bed narrowPeak
  • 58tsv
  • bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 116Homo sapiens
Biosample type
  • 66cell line
  • 48tissue
  • 2primary cell
Organ
  • 855pancreas
  • 656connective tissue
  • 481adipose tissue
  • 448epithelium
  • 433liver
  • 299heart
  • 250kidney
  • 159bone element
  • 159brain
  • 153vasculature
  • 151blood vessel
  • 116artery
  • 55eye
  • 49musculature of body
  • 38limb
  • 37embryo
  • 20lung
  • 17nerve
  • 16skeleton
  • 15blood
  • 15bodily fluid
  • 12spleen
  • 9vein
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 116AMP
Genome assembly (visualization)
  • 103GRCh38
  • 68hg19
Lab
  • 116AMP-T2D consortium
files.file_type!
  • bigBed narrowPeak
BIOSAMPLE
ASSAY

116 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery5286
tissue
coronary artery1362
tibial artery115
pulmonary artery2
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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