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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
8
snATAC-seq
2
ATAC-seq
2
WGBS
1
pCHi-C
Assay category
14
DNA binding
10
DNA accessibility
2
DNA methylation
Target of assay
14
control
Date released
8
January, 2021
8
November, 2018
4
December, 2018
4
January, 2019
1
January, 2018
1
March, 2020
1
October, 2017
Available data
84
bam
84
fastq
71
bigWig
68
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
27
Homo sapiens
Biosample type
12
tissue
8
primary cell
7
cell line
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
skin of body
1
small intestine
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
8
T1D
Genome assembly (visualization)
3
GRCh38
2
hg19
Lab
19
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bigBed narrowPeak
organ_slims!
mammary gland
spinal cord
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
snATAC-seq
ATAC-seq
WGBS
pCHi-C
tissue
spleen
8
1
2
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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