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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
59
histone
59
histone modification
33
narrow histone mark
28
control
26
broad histone mark
3
nucleotide modification
2
transcription factor
1
RNA binding protein
Date released
21
September, 2018
14
August, 2017
10
November, 2019
6
October, 2019
3
August, 2021
2
December, 2017
2
May, 2021
1
March, 2020
Available data
78
bam
78
bed narrowPeak
78
bigWig
51
fastq
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
59
Homo sapiens
Biosample type
44
primary cell
12
cell line
3
in vitro differentiated cells
Organ
102
pancreas
96
brain
69
connective tissue
68
liver
64
epithelium
41
heart
31
adipose tissue
19
musculature of body
12
embryo
8
kidney
5
blood vessel
5
vasculature
vein
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
1
pituitary gland
Project
57
AMP
2
T1D
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
59
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
bigBed narrowPeak
organ_slims!
vein
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
epithelial cell of proximal tubule
6
+ See 1 more…
cell line
EndoC_BH1
12
in vitro differentiated cells
Hepatic endoderm
2
pancreatic PP cell
1
See all biosamples
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