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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
candidate regulatory elements
61
target gene predictions
51
chromatin state
15
accessible chromatin
7
binding sites
6
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
2
variant allelic effects
Date released
140
September, 2022
60
February, 2021
9
June, 2020
7
November, 2021
6
May, 2021
5
March, 2020
4
May, 2020
3
August, 2017
3
February, 2020
3
February, 2024
3
January, 2022
2
March, 2024
1
January, 2020
1
November, 2019
1
October, 2022
Available data
189
bed bed3+
48
bed bed9
8
tsv
6
bigWig
1
bigBed bed9
Organism
248
Homo sapiens
Biosample type
207
tissue
34
cell line
7
primary cell
Organ
945
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
269
vasculature
263
pancreas
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
241
AMP
7
ENCODE
Genome assembly (visualization)
241
hg19
66
GRCh38
files.file_type!
bigBed narrowPeak
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
248 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
tibial nerve
6
3
4
3
2
2
3
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
fetal thymocyte
1
See all biosamples
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