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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
5
total RNA-seq
2
ATAC-seq
1
pCHi-C
Assay category
12
DNA binding
5
Transcription
2
DNA accessibility
Target of assay
11
control
1
histone
1
histone modification
1
narrow histone mark
Date released
18
October, 2019
1
February, 2020
1
March, 2020
Available data
43
bam
32
bigWig
28
bed narrowPeak
bigBed narrowPeak
6
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
20
Homo sapiens
Biosample type
19
tissue
1
cell line
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
20
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
organ_slims!
skin of body
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
11
5
1
islet of Langerhans
1
pituitary gland
1
cell line
MCF-7
1
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