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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
60
accessible chromatin
49
gene expression
49
target gene predictions
39
candidate regulatory elements
33
differential activity
23
chromatin state
16
eQTL
7
variant allelic effects
6
binding sites
6
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
61
September, 2022
47
March, 2023
38
February, 2021
34
May, 2021
20
January, 2021
18
November, 2021
16
February, 2024
10
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
5
June, 2020
4
January, 2020
3
August, 2017
3
November, 2019
2
February, 2020
1
April, 2019
1
February, 2023
1
January, 2018
1
March, 2024
Available data
185
bed bed3+
77
tsv
58
bigWig
19
bed bed9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
297
Homo sapiens
Biosample type
148
tissue
112
primary cell
34
cell line
3
in vitro differentiated cells
Organ
945
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
269
vasculature
263
pancreas
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
257
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
204
hg19
69
GRCh38
files.file_type!
bigBed narrowPeak
organ_slims!
esophagus
skeleton
BIOSAMPLE
TYPE
297 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
13
1
2
1
2
2
2
spleen
2
1
8
15
6
1
1
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic ductal cell
5
3
3
3
1
1
2
pancreatic acinar cell
5
3
3
3
1
pancreatic beta cell
7
3
2
3
pancreatic alpha cell
6
3
2
3
pancreatic delta cell
4
3
3
3
+ See 12 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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