Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
Hi-C
1
pCHi-C
Assay category
7
DNA binding
2
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
8
October, 2019
2
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
10
Homo sapiens
Biosample type
9
primary cell
1
tissue
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
10
AMP
Genome assembly (visualization)
4
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigBed narrowPeak
organ_slims!
kidney
lymph node
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
7
2
tissue
small intestine
1
Download