Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 8ChIP-seq
  • 2WGBS
  • 1ATAC-seq
  • 1pCHi-C
Assay category
  • 8DNA binding
  • 2DNA methylation
  • 1DNA accessibility
Target of assay
  • 8control
Date released
  • 5November, 2018
  • 4December, 2018
  • 1January, 2019
  • 1March, 2020
  • 1October, 2017
Available data
  • 24bam
  • 24fastq
  • 16bigWig
  • 14bed narrowPeak
  • bigBed narrowPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3+
  • 1bed broadPeak
  • 1bigBed broadPeak
  • 1tsv
Organism
  • 12Homo sapiens
Biosample type
  • 12tissue
Organ
  • 855pancreas
  • 656connective tissue
  • 481adipose tissue
  • 448epithelium
  • 433liver
  • 299heart
  • 250kidney
  • 159bone element
  • 159brain
  • 153vasculature
  • 151blood vessel
  • 116artery
  • 55eye
  • 49musculature of body
  • 38limb
  • 37embryo
  • 20lung
  • 17nerve
  • 16skeleton
  • 15blood
  • 15bodily fluid
  • 12spleen
  • 9vein
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 12AMP
Genome assembly (visualization)
  • 3GRCh38
  • 1hg19
Lab
  • 12AMP-T2D consortium
files.file_type!
  • bigBed narrowPeak
BIOSAMPLE
ASSAY

12 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen8211
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego