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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 21ChIP-seq
Assay category
  • 21DNA binding
Target of assay
  • 626histone modification
  • 625histone
  • 365narrow histone mark
  • 343control
  • 259broad histone mark
  • 109transcription factor
  • 21RNA binding protein
  • 8recombinant protein
  • 5nucleotide modification
  • 2chromatin remodeller
Date released
  • 6August, 2017
  • 5May, 2021
  • 5May, 2024
  • 2November, 2017
  • 1April, 2019
  • 1August, 2021
  • 1November, 2019
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • bigBed narrowPeak
  • 89fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 21Homo sapiens
Biosample type
  • 9in vitro differentiated cells
  • 8tissue
  • 4cell line
Organ
  • 5heart
  • 4connective tissue
  • 3liver
  • 3pancreas
  • 1epithelium
  • 1kidney
Project
  • 21AMP
Genome assembly (visualization)
  • 12GRCh38
  • 8hg19
Lab
  • 10AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigBed narrowPeak
BIOSAMPLE
ASSAY

21 results

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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell5
adipocyte4
tissue
left cardiac atrium5
islet of Langerhans2
kidney1
cell line
HepG23
EndoC_BH11
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