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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
25
ATAC-seq
2
Hi-C
Assay category
74
DNA binding
25
DNA accessibility
2
3D chromatin structure
Target of assay
57
control
13
histone
13
histone modification
8
narrow histone mark
5
broad histone mark
4
transcription factor
2
RNA binding protein
Date released
269
August, 2021
188
February, 2023
180
May, 2022
159
February, 2021
106
October, 2019
95
May, 2021
81
May, 2020
79
August, 2017
72
November, 2017
56
September, 2020
47
September, 2023
42
March, 2020
29
November, 2019
23
February, 2020
23
May, 2019
22
December, 2017
22
July, 2019
19
April, 2020
16
January, 2021
15
April, 2019
14
May, 2023
11
October, 2018
10
November, 2020
9
October, 2017
8
February, 2018
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
June, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2022
1
September, 2018
Available data
450
bam
bigWig
349
bed narrowPeak
324
fastq
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
20
tsv
3
tar
2
bedpe bed3+
2
hic
Organism
101
Homo sapiens
Biosample type
51
cell line
45
tissue
5
in vitro differentiated cells
Organ
47
liver
25
brain
24
pancreas
4
epithelium
1
adipose tissue
connective tissue
Project
101
AMP
Genome assembly (visualization)
27
hg19
26
GRCh38
Lab
101
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
files.file_type!
bigWig
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
101 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
HepG2
47
EndoC_BH1
2
1
1
tissue
islet of Langerhans
19
1
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
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in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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