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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
36
target gene predictions
32
chromatin state
21
binding sites
20
histone modifications
16
gene expression
15
accessible chromatin
8
eQTL
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
88
September, 2022
53
February, 2021
12
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
4
March, 2023
May, 2020
3
August, 2017
3
May, 2021
3
May, 2022
2
February, 2020
2
October, 2022
1
January, 2020
1
January, 2021
1
January, 2022
1
July, 2020
1
November, 2021
Available data
168
bed bed3+
bigWig
32
tsv
28
bed bed9
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
205
Homo sapiens
Biosample type
80
cell line
70
tissue
51
primary cell
4
in vitro differentiated cells
Organ
753
epithelium
600
kidney
428
brain
395
connective tissue
354
musculature of body
302
lung
278
intestine
222
heart
221
vasculature
220
limb
218
bodily fluid
213
embryo
213
pancreas
207
blood
199
skin of body
171
blood vessel
171
large intestine
143
extraembryonic component
127
liver
114
stomach
84
mammary gland
82
small intestine
82
uterus
81
adipose tissue
78
bone element
78
prostate gland
71
eye
71
placenta
67
adrenal gland
64
penis
62
lymph node
61
artery
58
ureter
49
gonad
47
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
ovary
22
thyroid gland
21
vein
20
nerve
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
10
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
203
AMP
1
ENCODE
1
T1D
Genome assembly (visualization)
182
hg19
51
GRCh38
2
hg18
files.file_type!
bigWig
csv
month_released!
May, 2020
BIOSAMPLE
TYPE
205 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
accessible chromatin
eQTL
differential activity
Fine-mapped variants
caQTL
variant allelic effects
cell line
HepG2
2
3
2
3
5
1
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
tissue
liver
13
10
9
1
2
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 1 more…
primary cell
hepatocyte
1
3
1
1
4
8
1
1
endothelial cell of hepatic sinusoid
6
4
hepatic stellate cell
1
1
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
1
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