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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
10
MeRIP-seq
1
ATAC-seq
Assay category
22
DNA binding
1
DNA accessibility
Target of assay
26
control
5
nucleotide modification
1
histone
1
histone modification
1
narrow histone mark
Date released
202
February, 2023
180
May, 2022
153
February, 2021
134
August, 2021
95
May, 2021
92
August, 2017
90
October, 2019
58
May, 2020
56
September, 2020
51
November, 2017
42
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
22
December, 2017
22
May, 2019
19
April, 2020
19
July, 2019
16
January, 2021
11
November, 2020
10
April, 2019
8
February, 2018
8
November, 2018
7
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
2
December, 2019
1
August, 2018
1
August, 2022
1
May, 2023
1
October, 2017
1
September, 2018
Available data
100
bam
94
fastq
bigWig
74
bed narrowPeak
51
bigBed narrowPeak
16
bed bed3+
4
tsv
1
bed broadPeak
1
bigBed broadPeak
Organism
33
Homo sapiens
Biosample type
16
tissue
9
in vitro differentiated cells
6
cell line
1
primary cell
1
stem cell
Organ
13
liver
10
pancreas
9
epithelium
5
embryo
1
connective tissue
Project
33
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
23
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
tagAlign
organ_slims!
kidney
BIOSAMPLE
ASSAY
33 results
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Clear Filters
ChIP-seq
MeRIP-seq
ATAC-seq
tissue
liver
9
islet of Langerhans
4
right lobe of liver
3
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
cell line
EndoC_BH1
6
primary cell
osteoblast
1
stem cell
hESC
1
See all biosamples
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