Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
71
chromatin state
9
binding sites
6
accessible chromatin
4
histone modifications
1
eQTL
1
variant allelic effects
Date released
210
September, 2022
70
February, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
November, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
Available data
239
bed bed3+
70
bed bed9
bigWig
tsv
Organism
301
Homo sapiens
Biosample type
180
tissue
96
cell line
25
primary cell
Organ
468
epithelium
378
brain
365
kidney
348
connective tissue
345
musculature of body
301
lung
275
intestine
217
bodily fluid
213
limb
206
blood
206
heart
203
embryo
197
skin of body
178
vasculature
169
large intestine
144
pancreas
143
extraembryonic component
138
blood vessel
116
liver
112
stomach
84
mammary gland
82
small intestine
80
uterus
77
prostate gland
75
bone element
71
eye
71
placenta
66
adrenal gland
64
penis
62
adipose tissue
62
lymph node
61
ureter
50
artery
48
thymus
47
gonad
esophagus
38
spinal cord
32
spleen
25
testis
23
lymphoid tissue
21
ovary
21
thyroid gland
21
vein
18
mouth
17
nerve
16
lymphatic vessel
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
10
skeleton
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
298
AMP
3
ENCODE
Genome assembly (visualization)
300
hg19
74
GRCh38
files.file_type!
bigWig
tsv
organ_slims!
esophagus
BIOSAMPLE
TYPE
301 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
tissue
lung
33
17
16
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
cell line
A549
21
19
18
2
1
1
IMR-90
2
2
1
2
1
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
NCI-H226 cell
1
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
4
2
lung microvascular endothelial cell
3
1
1
type II pneumocyte
2
1
type I pneumocyte
1
See all biosamples
Download