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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
11
ChIP-seq
1
pCHi-C
1
total RNA-seq
Assay category
12
DNA accessibility
11
DNA binding
1
Transcription
Target of assay
11
control
Date released
11
October, 2019
8
February, 2021
4
February, 2023
1
February, 2020
1
May, 2021
Available data
108
bam
bigWig
txt
63
tsv
35
bed narrowPeak
26
bigBed narrowPeak
4
bed bed3
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
24
tissue
1
primary cell
Organ
317
pancreas
223
epithelium
169
heart
169
liver
161
kidney
114
connective tissue
81
vasculature
80
blood vessel
adipose tissue
64
brain
56
artery
55
eye
31
limb
27
musculature of body
20
lung
14
blood
14
bodily fluid
13
bone element
12
nerve
12
skeleton
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
24
AMP-T2D consortium
1
Kyle Gaulton, UCSD
files.file_type!
bigWig
txt
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
ChIP-seq
pCHi-C
total RNA-seq
tissue
tibial nerve
11
1
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 8 more…
primary cell
megakaryocyte
1
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