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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 79ChIP-seq
  • 1Hi-C
Assay category
  • 79DNA binding
  • 13D chromatin structure
Target of assay
  • 75control
  • 4transcription factor
  • 2RNA binding protein
  • 1recombinant protein
Date released
  • 42November, 2017
  • 12October, 2018
  • 8August, 2017
  • 8December, 2017
  • 5November, 2018
  • 3January, 2019
  • 1December, 2018
  • 1October, 2017
Available data
  • 562fastq
  • 560bam
  • bigWig
  • 283bed narrowPeak
  • 244bigBed narrowPeak
  • 163tsv
  • 17bed broadPeak
  • 14bed bed3+
  • 11tagAlign
  • 10bigBed broadPeak
Organism
  • 79Homo sapiens
Biosample type
  • 48cell line
  • 31tissue
  • 1in vitro differentiated cells
Organ
  • 56liver
  • 13connective tissue
  • 12adipose tissue
  • 4blood
  • 4bodily fluid
  • 3pancreas
  • 3spleen
  • 1brain
Project
  • 80AMP
Genome assembly (visualization)
  • 1GRCh38
  • 1hg19
Lab
  • 80AMP-T2D consortium
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

80 results

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Clear Filters
ChIP-seq
Hi-C
cell line
HepG2431
GM128784
tissue
liver12
subcutaneous adipose tissue7
omental fat pad4
spleen3
pancreas2
in vitro differentiated cells
adipocyte1
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