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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22single cell RNA-seq
  • 22total RNA-seq
  • 18ATAC-seq
  • 18ChIP-seq
  • 1pCHi-C
Assay category
  • 44Transcription
  • 18DNA accessibility
  • 18DNA binding
Target of assay
  • 18control
Date released
  • 38September, 2020
  • 24May, 2022
  • 10October, 2018
  • 4December, 2018
  • 2December, 2017
  • 1August, 2018
  • 1November, 2017
  • 1November, 2018
Available data
  • 152fastq
  • 113bam
  • 88bed narrowPeak
  • bigWig
  • 67bigBed narrowPeak
  • 6bed bed3+
  • 6bed broadPeak
  • 6bigBed broadPeak
  • 6txt
  • 1bedpe bed3+
  • 1tsv
  • 1zippedFastqFolder
Organism
  • 81Homo sapiens
Biosample type
  • 40tissue
  • 38primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 44pancreas
  • 16epithelium
  • 7adipose tissue
  • 7connective tissue
  • 4spleen
  • 3liver
  • 1blood
  • 1bodily fluid
Project
  • 43AMP
  • 38HPAP
Genome assembly (visualization)
  • 18hg19
Lab
  • 38Klaus Kaestner, Upenn
  • 24Kyle Gaulton, UCSD
  • 19AMP-T2D consortium
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

81 results

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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans618
body of pancreas4
spleen4
omental fat pad3
subcutaneous adipose tissue3
primary cell
Langerhans cell22
pancreatic alpha cell15
pancreatic beta cell1
cell line
GM128781
HepG21
in vitro differentiated cells
white fat cell1
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