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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26ChIP-seq
  • 22total RNA-seq
  • 18ATAC-seq
  • 8WGBS
  • 2single cell RNA-seq
Assay category
  • 26DNA binding
  • 24Transcription
  • 18DNA accessibility
  • 8DNA methylation
Target of assay
  • 26control
Date released
  • 24May, 2022
  • 18September, 2020
  • 14October, 2018
  • 6February, 2021
  • 4December, 2018
  • 4November, 2017
  • 2August, 2017
  • 2December, 2017
  • 2November, 2018
Available data
  • 233fastq
  • 209bam
  • bigWig
  • 126bed narrowPeak
  • 102bigBed narrowPeak
  • 47tsv
  • 6txt
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2zippedFastqFolder
Organism
  • 76Homo sapiens
Biosample type
  • 46tissue
  • 24primary cell
  • 6cell line
Organ
  • 51pancreas
  • 22epithelium
  • 10adipose tissue
  • 10connective tissue
  • 7liver
  • 4spleen
  • 2blood
  • 2bodily fluid
Project
  • 52AMP
  • 24HPAP
Genome assembly (visualization)
  • 18hg19
Lab
  • 28AMP-T2D consortium
  • 24Klaus Kaestner, Upenn
  • 24Kyle Gaulton, UCSD
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

76 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
tissue
islet of Langerhans618
subcutaneous adipose tissue6
body of pancreas5
spleen4
omental fat pad3
primary cell
pancreatic alpha cell156
Langerhans cell2
pancreatic beta cell1
cell line
HepG24
GM128782
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