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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 45ChIP-seq
  • 4RRBS
Assay category
  • 45DNA binding
  • 4DNA methylation
Target of assay
  • 42control
  • 2histone
  • 2histone modification
  • 1broad histone mark
  • 1narrow histone mark
  • 1transcription factor
Date released
  • 20August, 2017
  • 8December, 2017
  • 8February, 2018
  • 6September, 2017
  • 3November, 2017
  • 3October, 2017
  • 1January, 2019
Available data
  • 264fastq
  • 258bam
  • bigWig
  • 200bed narrowPeak
  • 148bigBed narrowPeak
  • 93bed broadPeak
  • 84bigBed broadPeak
  • 39tagAlign
  • 37bed bed3+
  • 4bed bedMethyl
  • 4bigBed bedMethyl
Organism
  • 48Homo sapiens
Biosample type
  • 17tissue
  • 14in vitro differentiated cells
  • 13primary cell
  • 4cell line
  • 1stem cell
Organ
  • 20pancreas
  • 13epithelium
  • 6embryo
  • 6liver
  • 3brain
  • 2musculature of body
  • 1adipose tissue
  • 1blood
  • 1bodily fluid
  • 1connective tissue
Project
  • 49AMP
Genome assembly (visualization)
  • 11hg19
  • 7GRCh38
Lab
  • 49AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 2missing controlled_by
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

49 results

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Clear Filters
ChIP-seq
RRBS
tissue
islet of Langerhans6
brain3
liver21
pancreas2
skeletal muscle tissue2
in vitro differentiated cells
pancreatic endoderm5
definitive endodermal cell2
primitive gut cell2
Hepatic endoderm1
Posterior foregut1
primary cell
pancreatic alpha cell6
pancreatic beta cell6
skeletal muscle myoblast1
cell line
HepG23
GM128781
stem cell
hESC1
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