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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ATAC-seq
41
WGBS
33
single cell RNA-seq
26
total RNA-seq
21
snATAC-seq
Assay category
78
DNA accessibility
59
Transcription
41
DNA methylation
Date released
178
May, 2022
152
August, 2021
99
February, 2023
56
September, 2020
48
May, 2021
47
September, 2023
45
February, 2021
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
5
March, 2019
5
March, 2023
3
October, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
bigWig
6
txt
Organism
178
Homo sapiens
Biosample type
134
primary cell
44
tissue
Organ
104
pancreas
80
epithelium
20
liver
Project
134
HPAP
44
AMP
Genome assembly (visualization)
18
hg19
Lab
134
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
AMP-T2D consortium
files.file_type!
bigWig
lab.title!
AMP-T2D consortium
month_released!
June, 2019
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
178 results
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ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
islet of Langerhans
18
6
liver
20
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