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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
1
total RNA-seq
Assay category
19
DNA binding
1
Transcription
Target of assay
18
control
1
histone
1
histone modification
1
narrow histone mark
Date released
11
October, 2019
5
December, 2017
3
February, 2018
1
February, 2020
Available data
78
bam
bigWig
41
bed narrowPeak
27
fastq
26
bigBed narrowPeak
19
tsv
5
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
12
tissue
8
in vitro differentiated cells
Organ
223
kidney
181
pancreas
169
heart
169
liver
114
connective tissue
101
bone element
81
epithelium
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
lab.title!
Klaus Kaestner, Upenn
organ_slims!
stomach
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
tibial nerve
11
1
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
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