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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
263
control
52
histone
52
histone modification
36
narrow histone mark
16
broad histone mark
6
transcription factor
5
nucleotide modification
3
RNA binding protein
1
recombinant protein
Date released
August, 2017
24
October, 2019
8
November, 2017
2
May, 2021
1
December, 2017
1
October, 2017
Available data
bigWig
329
bed narrowPeak
313
bam
137
bigBed narrowPeak
105
tagAlign
58
fastq
14
bed broadPeak
9
bigBed broadPeak
7
bed bed3+
1
tagAlign bed3+
Organism
36
Homo sapiens
Biosample type
32
tissue
3
primary cell
1
in vitro differentiated cells
Organ
11
brain
4
gonad
4
ovary
2
eye
1
blood vessel
1
connective tissue
1
embryo
1
epithelium
1
limb
1
lymph node
1
vasculature
1
vein
Project
36
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
36
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
files.file_type!
bigWig
lab.title!
Kyle Gaulton, UCSD
month_released!
August, 2017
February, 2021
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
cingulate gyrus
3
substantia nigra
2
brain
1
caudate nucleus
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
in vitro differentiated cells
pancreatic endoderm
1
See all biosamples
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