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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
1
single cell RNA-seq
Assay category
79
DNA binding
1
Transcription
Target of assay
61
control
13
histone
13
histone modification
8
narrow histone mark
5
broad histone mark
5
transcription factor
2
RNA binding protein
1
recombinant protein
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
479
bam
bigWig
412
fastq
386
bed narrowPeak
385
bigBed narrowPeak
79
bed broadPeak
78
tagAlign
73
bigBed broadPeak
9
bed bed3+
7
bed bedMethyl
7
bigBed bedMethyl
3
tar
1
csv
Organism
80
Homo sapiens
Biosample type
51
cell line
28
tissue
1
primary cell
Organ
48
liver
25
brain
3
blood
3
bodily fluid
3
spleen
Project
80
AMP
Genome assembly (visualization)
1
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
48
GM12878
3
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
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primary cell
pancreatic cell
1
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