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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3015target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 977histone modifications
  • 911chromatin state
  • 817binding sites
  • 696accessible chromatin
  • 664gene expression
  • 484differential activity
  • 166eQTL
  • 137variant allelic effects
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2576February, 2021
  • 2507September, 2022
  • 1984July, 2026
  • 376May, 2021
  • 320May, 2026
  • 306February, 2024
  • 289June, 2020
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 108August, 2021
  • 102January, 2022
  • 102May, 2020
  • 96October, 2022
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 33November, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 4August, 2017
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 8015bed bed3+
  • 3530tsv
  • 869bed bed9
  • bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12315Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 966ENCODE
  • 552DGA
  • 393HDMA
  • 380T1D
  • 320pyxis
  • 296AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 146T2DKP
  • 133CATlas
  • 119 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 69CMDGA
  • 55HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5816tissue
  • 3450primary cell
  • 2550cell line
  • 498in vitro differentiated cells
  • 3stem cell
Organ
  • 3363blood
  • 2870vasculature
  • 2851bodily fluid
  • 2837blood vessel
  • 2657vein
  • 876brain
  • 766epithelium
  • 720kidney
  • 466heart
  • 449connective tissue
  • 430lung
  • 343intestine
  • 341musculature of body
  • 290skin of body
  • 261pancreas
  • 230limb
  • 220large intestine
  • 215liver
  • 212embryo
  • 171extraembryonic component
  • 136adipose tissue
  • 134stomach
  • 125eye
  • 111muscle organ
  • 100mammary gland
  • 96adrenal gland
  • 96bone element
  • 95placenta
  • 94small intestine
  • 92thymus
  • 92uterus
  • 87prostate gland
  • 79artery
  • 70ureter
  • 64penis
  • 63gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 24lymphoid tissue
  • 23nerve
  • 21mouth
  • 18lymphatic vessel
  • 16skeleton
  • 15breast
  • 14bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11873AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6400hg19
  • 3511GRCh38
  • 4hg18
files.file_type!
  • bigWig
lab.title!
  • Stephen Parker, UMich
BIOSAMPLE
TYPE

12319 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383712112412
stomach4240119311
brain302931811121
head of caudate nucleus86
primary cell
monocyte286121544121
fibroblast2831261026
CD8-positive, alpha-beta T cell2773013
T-cell644
endothelial cell17312982521
cell line
A549332111821
HeLa-S359531
H1-hESC39111218
K5623071621
MCF-71392531
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219110111
neural progenitor cell65154107
adipocyte7412131
embryonic stem cell11516
mesenchymal stem cell431211
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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