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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
7
ChIP-seq
1
ATAC-seq
1
single cell RNA-seq
Assay category
7
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
11
control
5
nucleotide modification
1
recombinant protein
1
transcription factor
Date released
270
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
106
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
93
bam
88
fastq
bigWig
75
bed narrowPeak
74
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
4
tsv
1
csv
Organism
19
Homo sapiens
Biosample type
10
cell line
7
tissue
2
primary cell
Organ
10
pancreas
6
epithelium
3
blood
3
bodily fluid
3
spleen
1
connective tissue
1
liver
Project
19
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
9
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
19 results
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Clear Filters
MeRIP-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
cell line
EndoC_BH1
6
GM12878
3
HepG2
1
tissue
islet of Langerhans
4
spleen
3
primary cell
osteoblast
1
pancreatic cell
1
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