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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
9
ChIP-seq
1
DNAme array
1
total RNA-seq
Assay category
29
DNA accessibility
9
DNA binding
1
DNA methylation
1
Transcription
Target of assay
5
control
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
Date released
139
August, 2017
120
August, 2021
119
February, 2021
107
October, 2019
103
February, 2023
81
May, 2020
72
November, 2017
44
March, 2020
36
May, 2021
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
2
May, 2022
1
August, 2018
1
August, 2022
1
May, 2023
1
November, 2020
1
October, 2022
1
September, 2018
Available data
172
bam
bigWig
127
tsv
40
bed narrowPeak
30
fastq
21
bigBed narrowPeak
6
tagAlign
Organism
40
Homo sapiens
Biosample type
19
cell line
19
primary cell
1
in vitro differentiated cells
1
tissue
Organ
17
epithelium
17
pancreas
3
blood
3
bodily fluid
1
spleen
Project
40
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
60
Kyle Gaulton, UCSD
40
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
ChIP-seq
DNAme array
total RNA-seq
cell line
EndoC_BH1
16
GM12878
3
primary cell
monocyte
13
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
in vitro differentiated cells
pancreatic PP cell
1
tissue
spleen
1
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