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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
51
binding sites
34
target gene predictions
29
histone modifications
19
accessible chromatin
5
chromatin state
4
eQTL
3
gene expression
Date released
September, 2022
116
February, 2021
31
February, 2024
20
October, 2022
19
June, 2020
May, 2021
5
August, 2017
3
March, 2024
3
November, 2021
2
August, 2021
2
January, 2022
1
March, 2020
Available data
198
bed bed3+
bigWig
3
tsv
Organism
202
Homo sapiens
Biosample type
142
cell line
48
tissue
12
primary cell
Organ
591
epithelium
391
kidney
269
connective tissue
254
brain
159
vasculature
149
musculature of body
145
pancreas
139
bodily fluid
134
blood
125
embryo
121
heart
120
blood vessel
108
intestine
92
skin of body
89
limb
88
lung
84
liver
68
large intestine
68
uterus
57
adipose tissue
46
eye
45
artery
43
stomach
41
extraembryonic component
40
mammary gland
37
bone element
37
lymph node
37
prostate gland
33
penis
24
gonad
24
small intestine
23
adrenal gland
22
esophagus
22
placenta
22
ureter
18
spinal cord
15
vein
14
nerve
14
spleen
14
testis
14
thymus
12
lymphatic vessel
9
lymphoid tissue
9
ovary
9
thyroid gland
8
bone marrow
8
bronchus
7
mouth
6
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
1
nose
1
pericardium
1
skeleton
Project
199
AMP
3
ENCODE
Genome assembly (visualization)
197
hg19
35
GRCh38
files.file_type!
bigWig
month_released!
May, 2021
September, 2022
BIOSAMPLE
TYPE
202 results
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Clear Filters
candidate regulatory elements
binding sites
target gene predictions
histone modifications
accessible chromatin
chromatin state
eQTL
gene expression
cell line
K562
1
2
16
1
1
1
GM12878
1
2
6
1
1
1
GM06990
1
2
1
1
GM19240
2
1
1
1
HL-60
1
2
1
1
+ See 30 more…
tissue
large intestine
15
1
1
sigmoid colon
5
1
1
transverse colon
4
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 9 more…
primary cell
peripheral blood mononuclear cell
4
1
1
colon epithelial cell
3
peripheral blood stem cell
1
1
1
See all biosamples
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