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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1215target gene predictions
  • 937chromatin state
  • 863histone modifications
  • 817binding sites
  • 590gene expression
  • 372accessible chromatin
  • 186eQTL
  • 172differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 4sQTL
  • 4variant to gene
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2576February, 2021
  • 2507September, 2022
  • May, 2021
  • 340February, 2024
  • 289June, 2020
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 108August, 2021
  • 102January, 2022
  • 102May, 2020
  • 101October, 2022
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5799bed bed3+
  • 3488tsv
  • 864bed bed9
  • bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9742Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 966ENCODE
  • 437DGA
  • 281KPMP
  • 269AMP
  • 180T1D
  • 1744DN
  • 151GTEx
  • 147T2DKP
  • 117 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 76BLUEPRINT
  • 69CMDGA
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 5172tissue
  • 2285cell line
  • 1864primary cell
  • 419in vitro differentiated cells
  • 4stem cell
Organ
  • 2879vasculature
  • 2855bodily fluid
  • 2844blood
  • 2822blood vessel
  • 2656vein
  • 748epithelium
  • 616kidney
  • 435brain
  • 409connective tissue
  • 358musculature of body
  • 298lung
  • 272intestine
  • 231heart
  • 227limb
  • 206embryo
  • 194skin of body
  • 187pancreas
  • 166large intestine
  • 140extraembryonic component
  • 137liver
  • 112stomach
  • 91adipose tissue
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 79bone element
  • 76prostate gland
  • 73eye
  • 70placenta
  • 68artery
  • 65adrenal gland
  • 63penis
  • 61lymph node
  • 61ureter
  • 48gonad
  • 47thymus
  • 43esophagus
  • 42spinal cord
  • 32spleen
  • 26testis
  • 24lymphoid tissue
  • 23nerve
  • 21lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 14bronchus
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9304AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6180hg19
  • 1443GRCh38
  • 4hg18
files.file_type!
  • bigWig
month_released!
  • May, 2021
BIOSAMPLE
TYPE

9746 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37202111322
stomach4019191131
brain291618311121
kidney291415217111
cell line
HeLa-S355431
A549211818121
H1-hESC13811281
K5627227121
MCF-7955231
primary cell
common myeloid progenitor, CD34-positive271313
B cell1798
CD4-positive, alpha-beta memory T cell1499
endothelial cell371282122
regulatory T cell54311522
in vitro differentiated cells
neural progenitor cell55415710
hematopoietic multipotent progenitor cell191010111
adipocyte4261113
cardiomyocytes11
mesenchymal stem cell322111
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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