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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
41
target gene predictions
36
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
3
February, 2024
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
131
bed bed3+
33
bed bed9
2
tsv
Organism
168
Homo sapiens
Biosample type
134
tissue
34
cell line
Organ
734
epithelium
616
kidney
445
brain
395
connective tissue
356
musculature of body
299
lung
270
intestine
vasculature
231
heart
230
limb
218
bodily fluid
213
embryo
213
pancreas
207
blood
194
skin of body
181
blood vessel
168
large intestine
143
extraembryonic component
134
liver
110
stomach
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
79
bone element
78
prostate gland
73
eye
71
placenta
66
artery
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
41
esophagus
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
21
thyroid gland
20
lymphatic vessel
19
mouth
13
breast
13
bronchus
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
168
AMP
Genome assembly (visualization)
164
hg19
37
GRCh38
files.file_type!
bigWig
month_released!
November, 2021
organ_slims!
vasculature
BIOSAMPLE
TYPE
168 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
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