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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ATAC-seq
43
single cell RNA-seq
41
WGBS
32
snATAC-seq
26
total RNA-seq
Assay category
89
DNA accessibility
69
Transcription
41
DNA methylation
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
43
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
bigWig
7
txt
1
bed bed3+
Organism
198
Homo sapiens
Biosample type
134
primary cell
65
tissue
Organ
104
pancreas
80
epithelium
20
liver
19
lung
2
musculature of body
Project
134
HPAP
46
AMP
19
LungMap
Genome assembly (visualization)
19
hg19
Lab
134
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
month_released!
March, 2023
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
199 results
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Clear Filters
ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
islet of Langerhans
18
6
liver
20
lung
9
10
skeletal muscle tissue
1
1
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