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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
7
ChIP-seq
1
ATAC-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
7
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
11
control
5
nucleotide modification
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
96
bam
92
fastq
bigWig
75
bed narrowPeak
74
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
7
tsv
1
bedpe bed3+
1
csv
Organism
20
Homo sapiens
Biosample type
10
cell line
7
tissue
2
primary cell
1
in vitro differentiated cells
Organ
10
pancreas
6
epithelium
3
blood
3
bodily fluid
3
spleen
2
connective tissue
1
adipose tissue
1
liver
Project
20
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
10
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
BIOSAMPLE
ASSAY
20 results
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Clear Filters
MeRIP-seq
ChIP-seq
ATAC-seq
pCHi-C
single cell RNA-seq
cell line
EndoC_BH1
6
GM12878
3
HepG2
1
tissue
islet of Langerhans
4
spleen
3
primary cell
osteoblast
1
pancreatic cell
1
in vitro differentiated cells
white fat cell
1
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