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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
21
ChIP-seq
Assay category
25
Transcription
21
DNA binding
Target of assay
21
control
histone
1
histone modification
1
narrow histone mark
Date released
271
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
81
May, 2020
80
October, 2019
72
May, 2021
63
August, 2017
59
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
3
October, 2017
1
August, 2018
1
August, 2022
1
September, 2018
Available data
63
bam
63
fastq
42
bed narrowPeak
bigWig
33
bigBed narrowPeak
25
tsv
5
bed bed3+
Organism
46
Homo sapiens
Biosample type
37
tissue
8
in vitro differentiated cells
1
stem cell
Organ
14
liver
12
brain
4
embryo
3
blood vessel
3
epithelium
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
pancreas
1
spinal cord
Project
46
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
46
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
bigWig
target.investigated_as!
histone
BIOSAMPLE
ASSAY
46 results
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Clear Filters
total RNA-seq
ChIP-seq
tissue
liver
9
right lobe of liver
1
3
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
+ See 21 more…
in vitro differentiated cells
Hepatic endoderm
2
pancreatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
stem cell
hESC
1
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