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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
47
single cell RNA-seq
Assay category
94
DNA binding
47
Transcription
Target of assay
76
control
14
histone
14
histone modification
9
narrow histone mark
5
broad histone mark
4
transcription factor
2
RNA binding protein
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
486
bam
418
fastq
bigWig
385
bed narrowPeak
362
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
15
bed bed3+
3
tar
Organism
141
Homo sapiens
Biosample type
84
tissue
47
cell line
9
in vitro differentiated cells
1
stem cell
Organ
60
liver
47
kidney
25
brain
5
embryo
3
epithelium
Project
94
AMP
47
KPMP
Genome assembly (visualization)
6
GRCh38
5
hg19
Lab
94
AMP-T2D consortium
47
KPMP
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
month_released!
September, 2017
BIOSAMPLE
ASSAY
141 results
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Clear Filters
ChIP-seq
single cell RNA-seq
tissue
kidney
47
liver
9
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
+ See 4 more…
cell line
HepG2
47
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
stem cell
hESC
1
See all biosamples
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