Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
17
ChIP-seq
16
total RNA-seq
Assay category
56
Transcription
17
DNA binding
Target of assay
17
control
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
19
April, 2020
17
December, 2017
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
June, 2019
8
November, 2018
September, 2017
5
December, 2018
5
December, 2019
5
February, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
122
fastq
81
bam
bigWig
64
bed narrowPeak
50
bigBed narrowPeak
19
zippedFastqFolder
12
bed bed3+
Organism
73
Homo sapiens
Biosample type
56
primary cell
12
tissue
4
in vitro differentiated cells
1
stem cell
Organ
19
epithelium
16
pancreas
13
liver
embryo
Project
56
HPAP
17
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
56
Klaus Kaestner, Upenn
17
AMP-T2D consortium
files.file_type!
bigWig
month_released!
September, 2017
organ_slims!
embryo
BIOSAMPLE
ASSAY
73 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
tissue
liver
9
right lobe of liver
3
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
primitive gut cell
1
stem cell
hESC
1
Download