Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
16
total RNA-seq
4
ChIP-seq
2
RNA microarray
1
Hi-C
Assay category
59
Transcription
4
DNA binding
1
3D chromatin structure
Target of assay
4
control
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
76
fastq
39
bam
bigWig
30
bed narrowPeak
30
bigBed narrowPeak
19
zippedFastqFolder
9
tsv
Organism
66
Homo sapiens
Biosample type
56
primary cell
7
tissue
2
in vitro differentiated cells
1
cell line
Organ
17
epithelium
16
pancreas
4
spleen
3
kidney
1
liver
Project
56
HPAP
10
AMP
Lab
56
Klaus Kaestner, Upenn
10
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
files.file_type!
bigWig
month_released!
April, 2019
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
RNA microarray
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
tissue
spleen
4
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cell line
HepG2
1
Download