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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
14
RRBS
4
Hi-C
4
WGBS
Assay category
18
DNA methylation
16
DNA accessibility
4
3D chromatin structure
Date released
269
August, 2021
188
February, 2023
180
May, 2022
159
February, 2021
106
October, 2019
95
May, 2021
81
May, 2020
79
August, 2017
72
November, 2017
56
September, 2020
47
September, 2023
42
March, 2020
29
November, 2019
23
February, 2020
23
May, 2019
22
December, 2017
22
July, 2019
19
April, 2020
16
January, 2021
15
April, 2019
14
May, 2023
11
October, 2018
10
November, 2020
9
October, 2017
8
February, 2018
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
June, 2019
5
March, 2019
5
March, 2023
January, 2019
4
July, 2018
4
October, 2022
1
August, 2022
1
September, 2018
Available data
bigWig
66
bam
49
tsv
22
bed bedMethyl
22
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
22
tissue
16
primary cell
Organ
10
pancreas
8
blood
8
bodily fluid
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
2
brain
2
liver
2
vasculature
1
blood vessel
connective tissue
1
eye
1
pericardium
Project
22
AMP
16
T1D
Genome assembly (visualization)
14
hg19
Lab
22
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
month_released!
January, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
38 results
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Clear Filters
snATAC-seq
RRBS
Hi-C
WGBS
tissue
islet of Langerhans
4
1
pancreas
4
1
gastrocnemius medialis
4
heart left ventricle
1
2
aorta
1
+ See 4 more…
primary cell
peripheral blood mononuclear cell
8
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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