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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ATAC-seq
14
RRBS
4
Hi-C
3
WGBS
2
total RNA-seq
Assay category
55
DNA accessibility
17
DNA methylation
4
3D chromatin structure
2
Transcription
Date released
254
August, 2021
202
February, 2023
161
February, 2021
160
May, 2022
106
October, 2019
103
August, 2017
96
May, 2021
57
May, 2020
56
September, 2020
47
September, 2023
42
March, 2020
30
November, 2019
29
October, 2018
25
November, 2017
24
February, 2020
23
May, 2019
21
July, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
December, 2017
9
October, 2017
8
February, 2018
8
June, 2019
7
November, 2018
6
September, 2017
5
December, 2019
5
March, 2019
5
March, 2023
4
December, 2018
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
bigWig
165
bam
103
tsv
22
bed bedMethyl
22
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
78
Homo sapiens
Biosample type
65
primary cell
13
tissue
Organ
liver
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
2
brain
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
78
AMP
Genome assembly (visualization)
14
hg19
Lab
78
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
month_released!
April, 2018
organ_slims!
liver
BIOSAMPLE
ASSAY
78 results
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ATAC-seq
RRBS
Hi-C
WGBS
total RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
cardiac fibroblast
1
cardiac muscle cell
1
+ See 7 more…
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
aorta
1
brain
1
islet of Langerhans
1
+ See 3 more…
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