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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42ChIP-seq
  • 29ATAC-seq
  • 17pCHi-C
  • 7total RNA-seq
  • 1DNAme array
Assay category
  • 42DNA binding
  • 29DNA accessibility
  • 7Transcription
  • 1DNA methylation
Target of assay
  • 24histone
  • 24histone modification
  • 12broad histone mark
  • 12narrow histone mark
  • 12transcription factor
  • 6control
  • 5RNA binding protein
Date released
  • 272August, 2021
  • 202February, 2023
  • 180May, 2022
  • 164February, 2021
  • 139August, 2017
  • 107October, 2019
  • 96May, 2021
  • 81May, 2020
  • 72November, 2017
  • 56September, 2020
  • 47September, 2023
  • 44March, 2020
  • 30November, 2019
  • 29October, 2018
  • 25February, 2020
  • 23July, 2019
  • 23May, 2019
  • 22December, 2017
  • 19April, 2020
  • 16January, 2021
  • 15April, 2019
  • 15May, 2023
  • 11November, 2020
  • 9October, 2017
  • 8February, 2018
  • 8June, 2019
  • 8November, 2018
  • 6September, 2017
  • 5December, 2018
  • 5December, 2019
  • 5March, 2019
  • 5March, 2023
  • 4January, 2019
  • 4July, 2018
  • 4October, 2022
  • 1August, 2018
  • 1August, 2022
  • 1September, 2018
Available data
  • bigWig
  • 277bam
  • 173tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 96Homo sapiens
Biosample type
  • 43in vitro differentiated cells
  • 35primary cell
  • 16cell line
  • 2tissue
Organ
  • 18pancreas
  • 17epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 79AMP
  • 17T1D
Genome assembly (visualization)
  • 13GRCh38
  • 13hg19
Lab
  • 60Kyle Gaulton, UCSD
  • 36AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

96 results

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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell375
pancreatic PP cell1
primary cell
monocyte113111
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
B cell1
cell line
EndoC_BH116
tissue
pancreas1
thymus1
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