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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54ChIP-seq
  • 4WGBS
  • 3total RNA-seq
  • 2ATAC-seq
  • 2pCHi-C
  • 1RNA microarray
Assay category
  • 54DNA binding
  • 4DNA methylation
  • 3Transcription
  • 2DNA accessibility
Target of assay
  • 30histone
  • 30histone modification
  • 24control
  • 20broad histone mark
  • 10narrow histone mark
Date released
  • 40August, 2017
  • 18October, 2018
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1March, 2020
  • 1May, 2023
  • 1November, 2019
Available data
  • 442bam
  • bigWig
  • 401tsv
  • 44fastq
  • 13bed narrowPeak
  • 10bigBed narrowPeak
  • 8tagAlign
  • 6bed bed3+
  • 3bed broadPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 2bigBed broadPeak
  • 1bedpe bed3+
Organism
  • 65Homo sapiens
Biosample type
  • 65tissue
  • 1in vitro differentiated cells
Organ
  • 323pancreas
  • 223epithelium
  • 223kidney
  • 169heart
  • 169liver
  • 114connective tissue
  • 101bone element
  • 81vasculature
  • 80blood vessel
  • 66adipose tissue
  • 64brain
  • 56artery
  • 55eye
  • 31limb
  • 28musculature of body
  • 20lung
  • 16skeleton
  • 14blood
  • 14bodily fluid
  • 12nerve
  • 9spleen
  • 8embryo
  • 7vein
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 66AMP
Genome assembly (visualization)
  • 3hg19
  • 2GRCh38
Lab
  • 66AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

66 results

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Clear Filters
ChIP-seq
WGBS
total RNA-seq
ATAC-seq
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue353
subcutaneous adipose tissue1011
omental fat pad81
adipose tissue11111
adipose tissue(adipose white tissue)1
in vitro differentiated cells
white fat cell1
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