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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
9
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
43
DNA accessibility
9
DNA binding
4
Transcription
Target of assay
9
control
4
histone
histone modification
4
narrow histone mark
Date released
35
February, 2023
10
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
82
bam
bigWig
59
tsv
54
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
57
Homo sapiens
Biosample type
47
tissue
10
cell line
Organ
314
pancreas
223
kidney
220
epithelium
169
heart
149
liver
101
bone element
78
vasculature
77
blood vessel
71
connective tissue
56
artery
53
eye
43
brain
36
adipose tissue
30
limb
22
musculature of body
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
7
embryo
4
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
57
AMP-T2D consortium
files.file_type!
bigWig
organ_slims!
lung
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
57 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
ovary
1
cell line
smooth muscle cell of the coronary artery
8
2
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