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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
target gene predictions
123
candidate regulatory elements
76
binding sites
73
chromatin state
50
gene expression
49
histone modifications
45
accessible chromatin
23
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
189
September, 2022
178
February, 2021
44
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
18
November, 2021
17
September, 2023
13
August, 2021
10
May, 2020
9
August, 2017
9
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
2
May, 2022
2
May, 2024
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
March, 2024
1
November, 2020
1
October, 2019
Available data
511
bed bed3+
66
tsv
64
bed bed9
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
612
Homo sapiens
Biosample type
246
primary cell
226
cell line
91
tissue
48
in vitro differentiated cells
1
stem cell
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
572
AMP
18
ENCODE
15
KPMP
4
ITG
2
community
1
T1D
Genome assembly (visualization)
538
hg19
127
GRCh38
2
hg18
files.file_type!
bigWig
organ_slims!
breast
ureter
BIOSAMPLE
TYPE
612 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
gene expression
histone modifications
accessible chromatin
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
4
1
2
1
fibroblast
4
1
2
2
6
osteoblast
2
2
3
1
2
2
2
fibroblast of dermis
4
4
1
3
+ See 45 more…
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
8
7
1
6
3
1
4
1
subcutaneous adipose tissue
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 7 more…
in vitro differentiated cells
adipocyte
6
4
1
6
1
1
3
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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