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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
114
candidate regulatory elements
96
target gene predictions
71
gene expression
68
chromatin state
45
differential activity
26
accessible chromatin
22
eQTL
21
binding sites
18
variant allelic effects
14
Fine-mapped variants
13
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
169
September, 2022
92
February, 2021
51
March, 2023
38
May, 2021
22
March, 2020
20
February, 2024
20
September, 2023
14
May, 2020
11
June, 2020
11
November, 2021
10
January, 2021
9
August, 2021
8
January, 2020
8
January, 2022
7
August, 2018
7
February, 2020
5
August, 2017
4
February, 2023
3
March, 2024
2
October, 2019
2
October, 2022
1
April, 2019
1
January, 2018
Available data
375
bed bed3+
125
tsv
bigWig
63
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
515
Homo sapiens
Biosample type
282
tissue
192
primary cell
38
cell line
3
in vitro differentiated cells
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
472
AMP
20
KPMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
380
hg19
111
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
515 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
accessible chromatin
eQTL
binding sites
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
tissue
stomach
40
21
1
19
3
1
1
islet of Langerhans
1
11
3
2
13
2
1
2
1
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
3
2
1
1
1
1
coronary artery
3
3
1
2
2
2
3
1
+ See 14 more…
primary cell
endothelial cell of umbilical vein
6
4
5
1
2
1
pancreatic ductal cell
3
3
3
1
1
1
2
dermis blood vessel endothelial cell
6
2
2
endothelial cell of hepatic sinusoid
4
6
pancreatic acinar cell
3
3
3
1
+ See 33 more…
cell line
EndoC_BH1
1
8
3
7
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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