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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
candidate regulatory elements
251
gene expression
159
target gene predictions
128
chromatin state
70
differential activity
49
accessible chromatin
38
binding sites
32
variant allelic effects
31
histone modifications
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
357
September, 2022
300
February, 2021
157
September, 2023
36
June, 2020
26
May, 2020
23
August, 2021
18
February, 2020
18
November, 2021
17
February, 2024
17
May, 2021
14
October, 2022
13
March, 2020
10
May, 2024
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
March, 2024
2
May, 2022
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
November, 2020
1
October, 2019
Available data
662
bed bed3+
316
tsv
122
bed bed9
93
txt
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1049
Homo sapiens
Biosample type
535
primary cell
393
tissue
71
cell line
49
in vitro differentiated cells
1
stem cell
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
869
AMP
155
KPMP
18
ENCODE
4
ITG
2
community
1
T1D
Genome assembly (visualization)
710
hg19
166
GRCh38
2
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
1049 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
differential activity
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
glomerular endothelial cell
2
14
1
1
1
1
fibroblast
3
4
2
1
6
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 104 more…
tissue
kidney
29
7
14
15
1
1
1
2
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
1
1
left kidney
18
9
9
+ See 26 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
1
6
6
3
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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