Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 88candidate regulatory elements
  • 78target gene predictions
  • 49gene expression
  • 48chromatin state
  • 34accessible chromatin
  • 31binding sites
  • 25histone modifications
  • 21eQTL
  • 16variant allelic effects
  • 12differential activity
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 108February, 2021
  • 20June, 2020
  • 18November, 2021
  • 17September, 2023
  • 16May, 2021
  • 14February, 2024
  • 12October, 2022
  • 11August, 2021
  • 10May, 2020
  • 10May, 2024
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 2January, 2025
  • 2July, 2025
  • 2May, 2022
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1January, 2020
  • 1January, 2021
  • 1November, 2020
  • 1October, 2019
Available data
  • 347bed bed3+
  • 64tsv
  • bigWig
  • 41bed bed9
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 415Homo sapiens
Collection Tags
  • 120EpiMap
  • 67DGA
  • 65ChIP-Atlas
  • 60ENCODE
  • 38 T2DKP
  • 36AMP
  • 28T2DKP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 8T1D
  • 7HPAP
  • 6FNIH_projects-heart
  • 6T2D
  • 6eQTLCatalogue
  • 2FNIH_projects-liver
  • 1BLUEPRINT
Biosample type
  • 249primary cell
  • 86tissue
  • 48in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 2874vasculature
  • 2853bodily fluid
  • 2842blood
  • 2817blood vessel
  • 2657vein
  • 785epithelium
  • 616kidney
  • 446brain
  • 415connective tissue
  • 370musculature of body
  • 302lung
  • 278intestine
  • 237heart
  • 230limb
  • 220pancreas
  • 213embryo
  • 199skin of body
  • 171large intestine
  • 143extraembryonic component
  • 134liver
  • 114stomach
  • 84mammary gland
  • 82adipose tissue
  • 82small intestine
  • 82uterus
  • 79bone element
  • 78prostate gland
  • 73eye
  • 71placenta
  • 67adrenal gland
  • 66artery
  • 64penis
  • 62lymph node
  • 61ureter
  • 49gonad
  • 48thymus
  • 43esophagus
  • 43spinal cord
  • 33spleen
  • 26testis
  • 24lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 19mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 373AMP
  • 18ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 1T1D
Genome assembly (visualization)
  • 340hg19
  • 85GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

415 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
fibroblast342126
fibroblast of lung6442
foreskin fibroblast621142
osteoblast2221232
pericyte cell3101
tissue
adipose tissue78361141
subcutaneous adipose tissue251613
omental fat pad522223
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4616311
mesenchymal stem cell332111
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego