Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 83target gene predictions
  • 80candidate regulatory elements
  • 63differential activity
  • 49gene expression
  • 48chromatin state
  • 34accessible chromatin
  • 31binding sites
  • 25histone modifications
  • 21eQTL
  • 16variant allelic effects
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 108February, 2021
  • 51May, 2026
  • 20June, 2020
  • 18November, 2021
  • 17September, 2023
  • 16May, 2021
  • 14February, 2024
  • 12October, 2022
  • 11August, 2021
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 5July, 2026
  • 2January, 2025
  • 2July, 2025
  • 2May, 2022
  • 2May, 2024
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1January, 2020
  • 1January, 2021
  • 1November, 2020
  • 1October, 2019
Available data
  • 344bed bed3+
  • 64tsv
  • bigWig
  • 41bed bed9
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 463Homo sapiens
Collection Tags
  • 120EpiMap
  • 67DGA
  • 65ChIP-Atlas
  • 60ENCODE
  • 51pyxis
  • 38 T2DKP
  • 36AMP
  • 28T2DKP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 8T1D
  • 7HPAP
  • 6T2D
  • 6eQTLCatalogue
  • 5ENCODE-rE2G
  • 1BLUEPRINT
Biosample type
  • 292primary cell
  • 89tissue
  • 50in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 3365blood
  • 2871vasculature
  • 2853bodily fluid
  • 2838blood vessel
  • 2658vein
  • 882brain
  • 776epithelium
  • 720kidney
  • 466heart
  • 463connective tissue
  • 431lung
  • 370musculature of body
  • 347intestine
  • 291skin of body
  • 262pancreas
  • 230limb
  • 223large intestine
  • 217liver
  • 213embryo
  • 171extraembryonic component
  • 137adipose tissue
  • 135stomach
  • 125eye
  • 111muscle organ
  • 101mammary gland
  • 96adrenal gland
  • 96bone element
  • 95placenta
  • 95small intestine
  • 92thymus
  • 92uterus
  • 87prostate gland
  • 79artery
  • 70ureter
  • 64penis
  • 63gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 24lymphoid tissue
  • 23nerve
  • 21mouth
  • 18lymphatic vessel
  • 16skeleton
  • 15breast
  • 14bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 421AMP
  • 18ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 1T1D
Genome assembly (visualization)
  • 332hg19
  • 82GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

463 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
differential activity
gene expression
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
fibroblast of lung4642
foreskin fibroblast261142
fibroblast42126
osteoblast2221232
fibroblast of dermis4431
tissue
adipose tissue87361141
omental fat pad452223
subcutaneous adipose tissue251613
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte7416311
mesenchymal stem cell432111
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248121111
fibroblast of cardiac tissue212
HT1080121
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego