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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
201
gene expression
97
candidate regulatory elements
94
target gene predictions
62
differential activity
51
chromatin state
36
accessible chromatin
34
binding sites
31
variant allelic effects
21
histone modifications
3
eQTL
2
caQTL
Date released
182
February, 2021
155
September, 2023
139
September, 2022
41
November, 2021
24
February, 2024
23
June, 2020
12
August, 2021
11
May, 2020
9
February, 2020
8
May, 2021
8
November, 2022
6
October, 2022
4
February, 2023
3
August, 2017
2
January, 2020
2
March, 2024
1
January, 2021
1
March, 2020
1
May, 2022
Available data
429
bed bed3+
254
tsv
bigWig
78
txt
48
bed bed9
2
bigBed bed9
1
bigBed narrowPeak
Organism
632
Homo sapiens
Biosample type
559
primary cell
40
tissue
19
cell line
14
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
435
AMP
155
KPMP
41
ENCODE
1
T1D
Genome assembly (visualization)
365
hg19
92
GRCh38
files.file_type!
bigWig
organ_slims!
liver
pancreas
uterus
BIOSAMPLE
TYPE
632 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
differential activity
chromatin state
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
endothelial cell of umbilical vein
6
4
5
1
2
1
foreskin keratinocyte
11
4
4
+ See 118 more…
tissue
breast epithelium
5
3
2
1
esophagus squamous epithelium
6
2
2
1
pigmented layer of retina
7
kidney epithelium
1
1
breast - mammary tissue
1
+ See 8 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
endothelial cell
1
+ See 1 more…
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