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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
172
candidate regulatory elements
129
target gene predictions
95
chromatin state
51
gene expression
33
differential activity
23
accessible chromatin
19
eQTL
14
binding sites
10
histone modifications
10
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
273
September, 2022
108
February, 2021
47
March, 2023
37
May, 2021
12
June, 2020
12
November, 2021
11
March, 2020
10
February, 2024
10
January, 2021
8
August, 2021
8
January, 2022
7
August, 2018
4
August, 2017
4
May, 2020
4
October, 2022
3
March, 2024
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2023
1
January, 2018
Available data
431
bed bed3+
90
bed bed9
79
tsv
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
565
Homo sapiens
Biosample type
314
tissue
129
cell line
119
primary cell
3
in vitro differentiated cells
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
541
AMP
12
ENCODE
10
T1D
2
community
Genome assembly (visualization)
467
hg19
114
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
565 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
differential activity
accessible chromatin
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
islet of Langerhans
1
3
11
2
13
2
1
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 9 more…
cell line
A549
21
19
18
1
2
1
EndoC_BH1
1
8
3
7
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 9 more…
primary cell
fibroblast of lung
6
4
4
2
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic acinar cell
3
3
3
1
pancreatic delta cell
3
3
3
1
pancreatic alpha cell
2
3
3
1
+ See 17 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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