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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 93single cell RNA-seq
  • 43ATAC-seq
  • 20ChIP-seq
  • 3Hi-C
  • 3pCHi-C
  • 3total RNA-seq
  • 2RRBS
  • 2WGBS
Assay category
  • 96Transcription
  • 43DNA accessibility
  • 20DNA binding
  • 4DNA methylation
  • 33D chromatin structure
Target of assay
  • 20control
Date released
  • 92August, 2021
  • 36February, 2023
  • 10April, 2019
  • 10February, 2021
  • 6May, 2019
  • 5March, 2020
  • 4July, 2019
  • 3February, 2020
  • 2June, 2019
  • 1October, 2019
Available data
  • bigWig
  • 211bam
  • 191bed narrowPeak
  • 168tsv
  • 94bigBed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 6tagAlign
  • 3bedpe bed3+
  • 3hic
Organism
  • 169Homo sapiens
Biosample type
  • 156tissue
  • 10cell line
  • 3primary cell
Organ
  • 323pancreas
  • 223epithelium
  • 223kidney
  • 169heart
  • 169liver
  • 114connective tissue
  • 101bone element
  • 81vasculature
  • 80blood vessel
  • 66adipose tissue
  • 64brain
  • 56artery
  • 55eye
  • 31limb
  • 28musculature of body
  • 20lung
  • 16skeleton
  • 14blood
  • 14bodily fluid
  • 12nerve
  • 9spleen
  • 8embryo
  • 7vein
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 169AMP
Genome assembly (visualization)
  • 43GRCh38
  • 13hg19
Lab
  • 169AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

169 results

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Clear Filters
single cell RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
total RNA-seq
RRBS
WGBS
tissue
coronary artery3521
heart left ventricle1861112
heart right ventricle17211
right cardiac atrium1811
left cardiac atrium18
cell line
smooth muscle cell of the coronary artery82
primary cell
cardiac fibroblast21
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